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Domain assignment for YP_205556.1.56684 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YP_205556.1.56684
Domain Number 1 Region: 439-540
Classification Level Classification E-value
Superfamily SpoIIaa-like 0.00000000000922
Family Anti-sigma factor antagonist SpoIIaa 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) YP_205556.1.56684
Sequence length 551
Comment transporter [Vibrio fischeri ES114]; AA=GCF_000011805.1; RF=reference genome; TAX=312309; STAX=668; NAME=Vibrio fischeri ES114; strain=ES114; AL=Complete Genome; RT=Major
Sequence
MFGQRFDNINLKGDLFGGVTTAIISLPLALAFGVASGAGAEAGLWGAIMVGLFASLFGGS
STLISEPTGPMTVIMTAVLTSMVAKYPETGMAMTFTVVMMAGAFQILLGTLKLGKYITLM
PYSVISGFMSGIGVILIILQLSPLLGHAAPPGGVIGTLSALPDTLSNLDIKELFLGGLTL
GVLFLFPDKYRKYVPAQLVALVAVTLLSVLFFDMESIRRIGEIPAGLPSLVIPTINFEMF
TTMVIDALVLGTLGCIDTLLTAVIGDSLTRKEHDSDKELRGQGLANMISGLFGALPGAGA
TMGTVTNIQVGARSPLSGVFRAAVLALVVLVAGGLTEPIPMAVLAGIAVYVGFNILDWSF
IQRAHKVSFAGMAIMYGVMLLTVFVDLIVAVGLGVFISNIIIIERLSREQARQVKAISDA
DEDDVPLTDSERALLDKANGKVLFFYLSGPMIFSVSKAISRQHSSISDYEVMILDLTDVP
MIDVTVGLALENAINDALDANCKVYLLCPNEQTKEQLDKFHVTDLIPSENTYKFRYEALK
SAIKYVSPSED
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Identical sequences Q5E2S8
WP_011262614.1.76652 YP_205556.1.56684 GO.9173 gi|59712780|ref|YP_205556.1| 312309.VF_2173

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