SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for YP_206784.1.56684 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  YP_206784.1.56684
Domain Number 1 Region: 4-251
Classification Level Classification E-value
Superfamily ABC transporter involved in vitamin B12 uptake, BtuC 9.42e-45
Family ABC transporter involved in vitamin B12 uptake, BtuC 0.00055
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) YP_206784.1.56684
Sequence length 277
Comment ferric anguibactin transport system permease protein FatD [Vibrio fischeri ES114]; AA=GCF_000011805.1; RF=reference genome; TAX=312309; STAX=668; NAME=Vibrio fischeri ES114; strain=ES114; AL=Complete Genome; RT=Major
Download sequence
Identical sequences Q5DZA0
YP_206784.1.56684 312309.VF_A0826 gi|59714009|ref|YP_206784.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]