SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|386866481|ref|YP_006279475.1| from Bifidobacterium animalis subsp. animalis ATCC 25527

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|386866481|ref|YP_006279475.1|
Domain Number 1 Region: 399-609
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 2.14e-62
Family Pyruvate oxidase and decarboxylase PP module 0.0000124
Further Details:      
 
Domain Number 2 Region: 27-211
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 5.89e-60
Family Pyruvate oxidase and decarboxylase Pyr module 0.0000056
Further Details:      
 
Domain Number 3 Region: 216-389
Classification Level Classification E-value
Superfamily DHS-like NAD/FAD-binding domain 4.82e-56
Family Pyruvate oxidase and decarboxylase, middle domain 0.000031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|386866481|ref|YP_006279475.1|
Sequence length 642
Comment acetolactate synthase 1 catalytic subunit [Bifidobacterium animalis subsp. animalis ATCC 25527]
Sequence
MSPTPLQAFSGVAKANANQHTHMRTIVDGEKMTGAQALVRSLEDLGVKDVFGIPGGAILP
VYDAIDEHTKFRFVLMRHEQAAGHAAEGYAVATGEVGVCIVTSGPGATNVITAIADANMD
SIPMIVITGQVGVNAIGTDAFQEADIVGATYPVAKHSYLVTDAQDIPRVLSEAHYIARSG
RPGPVVVDLTKTAQNGTMYYSWPQRMILPGYNPTTEAHGRVLDDAAKLFQHAFRPVLYVG
GGAVRSDAGAEVKALSDLTGAPIVTTLPARGIVPDDDPAVLGMPGMHGTIAATGAVQRSD
LLVAIGARFDDRVTGKLEAFAPGARVVHIDIDPAEIGKNRTPDVPIVGDVKTVLSALMPR
IERQHAIHGKPNLTTWWGLINSWVEKYPLTYQEPTDGTLAPQWVVEELSHAANPETIWVS
GVGQHQMWATQFINFSHPHQWISSGGLGTMGFGLPAAIGASIGSQRYFDGKKPVWLIDGD
GSFQMTSEELAAAFLEGAPVKIALLNNSVYGMVRQWQTLFYNNHYSATILHEEEKTGLEG
VPNFVKLAEAYGCVALRARTKDEAVEAIRRANEINDRPVLIDFRVWKDAMVWPMVAAGDS
NDNVTYLPGIKPLHQADGLAAMPVDSDAQADEAAAIITEEQD
Download sequence
Identical sequences gi|386866481|ref|YP_006279475.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]