SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOGAP00000004680 from Otolemur garnettii 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOGAP00000004680
Domain Number 1 Region: 16-79
Classification Level Classification E-value
Superfamily DNA-binding domain 0.0000523
Family Methyl-CpG-binding domain, MBD 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOGAP00000004680   Gene: ENSOGAG00000005233   Transcript: ENSOGAT00000005236
Sequence length 1003
Comment pep:known_by_projection scaffold:OtoGar3:GL873562.1:11927203:11933257:1 gene:ENSOGAG00000005233 transcript:ENSOGAT00000005236 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNGGNESSGADRAGGPVATSVPIGWQRCVREGAVLYISPSGTELSSLEQTRSYLLSDGTC
KCGLECPLNVPKVFNFDPLAPVTPGGAGVGPASEEDMTKLCNHRRKAVAMATLYRSMETT
CSHSSPGEGASPQMFHTVSPGPPSARPPCRVPSATPLNGGPGSIPPEPPSVPQAFPPLAG
PGGLFPPPRLPEPVPSGSSSSPCFLPRGNAPSPAPPPPPAISLNAPSYNWGATLRSSLVP
SDLGSSPAPHASSSPPSDPPLFHCSDALTPPSLPPSNNLPGPPGPATQPPVSSATMHLPL
VLGPLGGAPTVEGPGAPPFLASSILSAAAKAQHPPLPPPSTLQGRRPRAQAPSAPHSSSL
RLSSQRRPRRPPTVLRLLEGGGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGL
PTPGPSPSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSISSVPGAPAP
PAASKAPVVPSPVLQSPSEGLGMGAGPACPLPSLAGGEAFPFPSPEQGLALSGAGFPGML
GALPLPLSLGQPPPSPLLSHSLFSVLAGGGQPPPEPLLPPPGGPGPPLAPGEPEGPSLLV
APLLPPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDL
PPLLFPPLSAPPTLIALNSALLAASLDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGA
SSLGKAPSNSGRPPQLLSPLLSASLLGDLSSLTSSPGTLPSLLQPPGPLLSGQLGLQLLP
GGAPPPLSEASSPLACLLQSLQIPPEQPEAPCLPPESPTSALEPEPIRPPLSALAPSHSS
PDPPVPELLTGRGSGKRGRRGGGGLRGINGEARPGRGRKPGSRREPGRLAFKWGTRGGFN
GQMERSPRRTHHWQHNGELAEGGAEPKDPPPAGPHSEDLKVPPGVVRKSRRGRRRKYNPT
RNSNSSRQDITLEPSPTTRAAVPLPPRARPGRPAKNKRRKLAP
Download sequence
Identical sequences H0WRM1
ENSOGAP00000004680 XP_012661016.1.62490 ENSOGAP00000004680

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]