SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOGAP00000008402 from Otolemur garnettii 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOGAP00000008402
Domain Number 1 Region: 41-214
Classification Level Classification E-value
Superfamily PR-1-like 1.1e-54
Family PR-1-like 0.00011
Further Details:      
 
Domain Number 2 Region: 283-381
Classification Level Classification E-value
Superfamily LCCL domain 1.15e-29
Family LCCL domain 0.001
Further Details:      
 
Domain Number 3 Region: 385-490
Classification Level Classification E-value
Superfamily LCCL domain 1.31e-27
Family LCCL domain 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOGAP00000008402   Gene: ENSOGAG00000009377   Transcript: ENSOGAT00000009384
Sequence length 496
Comment pep:known_by_projection scaffold:OtoGar3:GL873566.1:648296:695433:-1 gene:ENSOGAG00000009377 transcript:ENSOGAT00000009384 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSPVLGTVIPLGLVLLVCGAQGYLLPNVTRLEELLSRYRAEPHSRVRRAIPREDREEILM
LHNKLRGQVHPPASNMEHMTWDEELEKSAAAWAQECIWEHGPTGLLVSIGQNLAVHWGRY
RSPGFHVQSWYDEVKDYTYPYPHECNPWCPERCSGAMCTHYTQIVWATTNKVGCAVNTCR
RMTVWGDVWENAVYLVCNYSPKGNWIGEAPYKTGRPCSQCPPSYGGGCRNNLCYREETYH
HKPETDEMNEVETAPIPEEKHVWVQPRVVRPTKPKKTSAVSYMTQVIRCDTKMKDKCKGS
TCNRYQCPAGCLNNKAKIFGTLFYESASSICRAAIHYGILDDQGGLVDITRNGKVPFFVK
SNRNGIESSSKYKPSSSFMVSKVKVQDLDCYTTVAQLCPFEKPATHCPRVHCPAYCKDEP
AYWAPVFGTNIYADTSSICKTAVHAGVLRDESGGYVDVMPVDKKKTYVGSLRNGVQSESL
GSPRDGKAFRIFAVRQ
Download sequence
Identical sequences H0X0G4
XP_003791337.1.62490 ENSOGAP00000008402 ENSOGAP00000008402

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]