SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOCUP00000003371 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOCUP00000003371
Domain Number 1 Region: 581-607
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.0000000033
Family Ran binding protein zinc finger-like 0.00042
Further Details:      
 
Domain Number 2 Region: 6-80
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000255
Family Ubiquitin-related 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000003371   Gene: ENSOCUG00000003888   Transcript: ENSOCUT00000003886
Sequence length 608
Comment pep:known_by_projection scaffold:OryCun2.0:GL019359:2395:58404:1 gene:ENSOCUG00000003888 transcript:ENSOCUT00000003886 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
FHLQQIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASS
NKSLSLLRIKHGDLLFLFPSSLAGPSSEMETSTTLGLKALGSAHVVEDEIDQYLSRQDGK
IYRSRDPQLLCTQRSFQACAHTPPLRPHLHSVHLVPKXKHMSCHAYIRKLTGGPTTLGKF
VALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHVDNIMFENHTVADRFLDF
WRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQNSLELLEDPKADVVDEIA
AKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPD
GHFGSKFVTAVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCKDAPELGYAKESSSEQY
VPDVFYKDIDKFGNEITQLARPLPVEYLIIDITTTFPKDPVYTFSISQNPFPIENRDVLG
ETQDFHSLAAYLSQNTSSMFLDTVSDFHLLLFLVTNEVMPLQDSISLLLEAVRTRNEELA
QTWKKSEQWATIEQLCSTVGVQLPGLHEYGAVGGSVHAAPAAMWACQHCTFMNPPGTGHC
EMCSLPRA
Download sequence
Identical sequences G1SKM5
ENSOCUP00000003371 ENSOCUP00000003371 9986.ENSOCUP00000003371

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]