SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOCUP00000003991 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOCUP00000003991
Domain Number 1 Region: 258-494
Classification Level Classification E-value
Superfamily vWA-like 7.07e-35
Family Integrin A (or I) domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000003991   Gene: ENSOCUG00000004620   Transcript: ENSOCUT00000004625
Sequence length 946
Comment pep:known chromosome:OryCun2.0:16:12055884:12101847:1 gene:ENSOCUG00000004620 transcript:ENSOCUT00000004625 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKGLTCFLVWLLLSEAQAFEIPTNGLSEFAEYSDFAELAPGKFQFVPDNRRYERSLPGES
GEEREDVDQVTLYSYKVQSTITSRMANTIIQSKLVNNSPQPQNVVFDVEIPKGAFISNFS
MTIDGTTFTSSIKEKTVGRALYSQARAKGKTAGLVRSKALDMENFQTEVNVLPGAKVQFE
LHYQEVKWRKLGSYEHRLHLKPGRLAKHLEVDVWIIEPQGLRFLHVPDTFEGHFDGVPVV
LKGPQKAHVSFKPTVAQQRKCSNCSETAVDGQLVVMYDVNREEKAGELEVFNGYFVHFFA
PDNLEPIPKNILFVIDVSGSMWGVKMKQTVEAMKTILDDLRAEDHFSVVDFNHNIRTWRN
DLVSATKTQIADAKRYIEKIQPNGGTNINEALLRAIFILNEANNMGLLDPNSVSLIILVS
DGDPTVGELKLSKIQKNVKQNIQDNVSLFSLGIGFDVDYDFLKRLSNENRGIAQRIYGNQ
DTSSQLKKFYNQVSTPLLRNVQFNYPHTSVTDVTQNSFHNYFGGSEIVVAGKFDPDKLKQ
IQSIITATSANTELVLETLAQMDDLEEFLSKDKHADPDFTKKLWAYLTINQLLAERSLAP
TAATKRRITKTILQMSLEHHIVTPLTSMVIENDAGDERMLADSPPQDHSCCAGALYYGEK
VPSNGIPSWANAAPTPVVPMRLAGAPVLESTPPPHVMRVENDPHFIIYLPKSQENICFNI
DSEPGKILNLVSDPESGVSVNGQLIGAKKPQKGKLHTYFGTLGFYIRSEDTKIEITTETI
TLSRGSHTSILSWFDTAHVAYQRVLVSVKKEKTVTVTLNKELSFSVLLHRVWKKHPINVD
FLGIYIPPTSKFSPNAHGLIGQFMHEPSVRIFNGRPGRDPKKPEASMEVKGHTLTVTRGL
QKDYRTDVVFGTDVPCWFVHNSGKGFIDGHYKDYFVPHLYSFLKRP
Download sequence
Identical sequences G1SM64
ENSOCUP00000003991

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]