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Domain assignment for ENSOCUP00000012473 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000012473
Domain Number 1 Region: 40-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.58e-37
Family SCAN domain 0.00000683
Further Details:      
 
Domain Number 2 Region: 348-400
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.15e-20
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 3 Region: 322-357
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000127
Family Classic zinc finger, C2H2 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000012473   Gene: ENSOCUG00000014506   Transcript: ENSOCUT00000014503
Sequence length 407
Comment pep:known_by_projection scaffold:OryCun2.0:GL018828:624833:633459:1 gene:ENSOCUG00000014506 transcript:ENSOCUT00000014503 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAKMEITLSSHPQASSKQERHIIAKLEEKREPAPQKSRPDPELSRQSFRRFCYQEVSGP
QEALAQLRLLCRQWLQPELHTKEQILELLVMEQFLTILPPELQARVRRRRPGSSKEMVSL
VEDFQRAAKKPKQWVAVCMQGQKVLFEKTGSQLEEELPDLPPHAPRRDLREDCVEELSQA
ESHDRVSPHQWEKSPLLQEPAPRVAGAEAPRVGSDNKENPQPEGAKGAKPCAASAGRSRG
GGLQSPEPRGASLAEPRLSRRQGGSQSAQKPFAHYQRHCRELDHISSPLKTHPLRELKKS
KGGRRGLSGRLPRLGHPAPRSARKPYRCDDCGKSFTWNSELKRHKRVHTGERPYACGECG
HCFGRQSTLKLHQRIHTGEKPYQCSQCGKSFRQSSNLHQHHRLHHGD
Download sequence
Identical sequences G1T7J4
9986.ENSOCUP00000012473 XP_002722816.1.1745 ENSOCUP00000012473 ENSOCUP00000012473

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