SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOCUP00000018836 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOCUP00000018836
Domain Number 1 Region: 89-364
Classification Level Classification E-value
Superfamily Pseudouridine synthase 3.2e-46
Family Pseudouridine synthase RsuA/RluD 0.00098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000018836   Gene: ENSOCUG00000017039   Transcript: ENSOCUT00000030911
Sequence length 377
Comment pep:known_by_projection chromosome:OryCun2.0:1:90871441:90881430:1 gene:ENSOCUG00000017039 transcript:ENSOCUT00000030911 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAVLGCGASGLRARGRGLRLESFFPVVSKPFCSTAAASRPLDAQRLAEKLRAQKREEKLK
ERVPTNPVQRRVRELVRFTQQLQRVHPNVLAKALSRGILHQDKDLVVISKPYGLPVHGGP
GVRLCISDVLPILAKMLRGHKAEPLHLCHRLDKETTGVMVLTWEKEVAHQVQELFRTRQV
VKKYWAITVHVPVPSAGVVDIPIIEKEVQGQRQHHKMTLSPSYRMDNGKMVKVRSSRSAH
LAVTQYQVLSSTLSSALLELQPITEGIKHQLRVHLSFGLECPILGDHKYSDWNRLAPQKL
PGGTLKKLGLEQSKARHIPLHLHARQLILPALGSRKEELNLTCKLPHFFVRSLSRLGLEM
PNQDQNDKTQAFCPAAV
Download sequence
Identical sequences G1TPA4
9986.ENSOCUP00000018836 ENSOCUP00000018836 ENSOCUP00000018216

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]