SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000001917 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000001917
Domain Number 1 Region: 2-62
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 4.05e-19
Family KRAB domain (Kruppel-associated box) 0.001
Further Details:      
 
Domain Number 2 Region: 342-391
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.13e-19
Family Classic zinc finger, C2H2 0.0091
Further Details:      
 
Domain Number 3 Region: 240-292
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.2e-19
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 4 Region: 196-251
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.58e-16
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 5 Region: 278-331
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000057
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 6 Region: 380-415
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000389
Family Classic zinc finger, C2H2 0.017
Further Details:      
 
Weak hits

Sequence:  ENSMODP00000001917
Domain Number - Region: 444-468
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0559
Family Classic zinc finger, C2H2 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000001917   Gene: ENSMODG00000001573   Transcript: ENSMODT00000001959
Sequence length 468
Comment pep:novel chromosome:BROADO5:1:641647374:641650069:1 gene:ENSMODG00000001573 transcript:ENSMODT00000001959 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PSQGSITFRDVVVNFIKEEWCLLDHSQKEPYKEVMLENVQNLQSVGLTVPRENFVTYFQQ
GELPWLLEQKGQWSSCPEAETNFEVKEMCNNLSLFWSCDFISREIYDADIRINRIPMSDY
EFDETAEKFSQYSVLNHTCFPEEVGFIQLPEKPPDTLMYQGNLREMAFDWSLNVISHPKS
KCIEMLTMNNKVGRPFSQNYDLGSHQIFHTGEKLKNVQCGKVFTQSGDLSRHQRIHTAEK
PYECRQCGMTFTQKCLLARHFRTHTGEKPYECKQCGKAFIEKGSLGVHQRMHNEEKPYCL
PCGQVFRVRYDLCKHQRVHTSEKTYECHVKGIEHRGLMAPSTEHMRIHTGEKFYECRQCR
KAFTLRNSLSVHQRIHTGKKPYACRQCGMAFTLRHLASHQSIHIGENLYACHQFNIEIEM
ESLELVQYEIMSSEQTSSRWIPHRKAFSQRSSLISCQRIHSAEKLDEC
Download sequence
Identical sequences F7BX10
ENSMODP00000028427 13616.ENSMODP00000001917 ENSMODP00000001917

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]