SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000018527 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000018527
Domain Number 1 Region: 460-639
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.54e-51
Family SPRY domain 0.00085
Further Details:      
 
Domain Number 2 Region: 6-77
Classification Level Classification E-value
Superfamily RING/U-box 8.62e-18
Family RING finger domain, C3HC4 0.014
Further Details:      
 
Domain Number 3 Region: 157-217
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000000229
Family B-box zinc-binding domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000018527   Gene: ENSMODG00000014814   Transcript: ENSMODT00000018860
Sequence length 641
Comment pep:known_by_projection chromosome:BROADO5:2:176276300:176308270:1 gene:ENSMODG00000014814 transcript:ENSMODT00000018860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAELQLTEEMTCSICLELFHHPVTIPCGHNFCSPCLNETWTVQGPPFYCPQCRTSFLTRP
QLQKNTALCSVVDHLQQIQSRQELGSLCEEAKRGESWDLPSRKEGQGKEAEAVSVACDHC
LQAPAAKTCFTCMASFCQEHLRPHLDNPAFQGHALQQPVPDLARRKCAEHSRLREFFCPQ
HGACICCVCLVGHKTCSPVALDIARNDLKSKMKQKLTTAYDDINKASSALKDVKLKQLAV
QETAARKIDLLKREYEEMKTLIESEEKRALRKLKEEEKRVLDKYDYVHQVLLKKKKEIEF
VKEEIELLLTKDDEIAFLEKASKLQEILIKSVYVPKNELNQEMINGVYQHAFSLKEALKH
NITHLQEKKTEEATSSDDSGKPSSSFRPAYPTKDHYQTRRIQTPVPAATPSQKPSLGTMP
DLADLKTALSDTTEKGAAALPKNSPTRKTQILETFLAKSRPELLQYATQVVLDFNTAHNK
VALSENYTVASVATVPQNYRPHPQRFTFCSQVLGLHGYKRGVHYWEVELQKNTFCGIGIC
YASMDRQGPDSRLGRNNSSWCVEWFNTKISTWHNDVEKNLPLTKATRIGVLLNCDDGFVI
FFAITDKVSLIYKYKVEFSEVVYPAFWVFSSGTTLSICSLK
Download sequence
Identical sequences F7DLN9
ENSMODP00000018527 ENSMODP00000018527

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]