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Domain assignment for ENSMODP00000020981 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000020981
Domain Number 1 Region: 43-133
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.11e-36
Family SCAN domain 0.0000652
Further Details:      
 
Domain Number 2 Region: 407-464
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.89e-24
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 3 Region: 449-501
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.05e-21
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 4 Region: 351-408
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.13e-16
Family Classic zinc finger, C2H2 0.0093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000020981   Gene: ENSMODG00000016810   Transcript: ENSMODT00000021351
Sequence length 505
Comment pep:novel chromosome:BROADO5:1:739815398:739824474:-1 gene:ENSMODG00000016810 transcript:ENSMODT00000021351 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TLPQGKAMAVVVPKPRPLTLRQQDGVLATDAPVKREALLAAEPWDPEASRHNFRHFRYTQ
ASGPRKALSQLRGLCLQWLRPEIHTKQQIMELLVLEQFLIILPREIQAWVKSQHPDNSEE
VVTLLENLAQVLEGGGEVPALAKAPRRPPVRQQQEVLDHCGKHVPVSLRELNEQGRARRI
RGDSFWCLLPLPWPRSWTSQAKVGLQREHGSSADKCGGRVGRAALTSSRLSSLGHSATKG
GSGSFPAEGTAQREREDFHWQGEFWQPEMPRTLLQVWAARLPQVGFTRLLFLPVSRNPKN
PRSRLPREAKSPTACRAAAQVSEGGLGTPQASVSASQRQAVIRCVPTVLSSFRQFSDPIK
CKRIRVGPKAYKCKECGETFSDCSTCIRHQRVHTGEKPYRCAECGEAFTRGTSLTEHRRT
HTGEKPYACRACDKAFTRRSSLVKHQRVHTGEKPYACGVCGKAFSHGSALIIHQRIHTGE
KPYKCGQCAKAFSNSSALIRHQQHH
Download sequence
Identical sequences F7FV94
ENSMODP00000020981 ENSMODP00000020981 13616.ENSMODP00000020981

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