SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSMODP00000023297 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000023297
Domain Number 1 Region: 489-545
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.29e-23
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 2 Region: 545-601
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.13e-22
Family Classic zinc finger, C2H2 0.0044
Further Details:      
 
Domain Number 3 Region: 450-502
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.64e-19
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 4 Region: 356-416
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.95e-19
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 5 Region: 586-638
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.86e-19
Family Classic zinc finger, C2H2 0.0029
Further Details:      
 
Domain Number 6 Region: 406-439
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000134
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Weak hits

Sequence:  ENSMODP00000023297
Domain Number - Region: 289-315
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000643
Family Classic zinc finger, C2H2 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000023297   Gene: ENSMODG00000018688   Transcript: ENSMODT00000023712
Sequence length 644
Comment pep:known_by_projection chromosome:BROADO5:2:492154073:492209924:1 gene:ENSMODG00000018688 transcript:ENSMODT00000023712 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSEGRSPETILPLRYKAEQEAPVRSQPAAAAAAAAQGQDRRRGCRHGRAAEPEPPPPRLL
LPPLSAQLLKKILISQKVDLLQALANPRNHSLFLKVADTGISGQFLAWFSRMEQEEELGV
SGLQDSGDRGMGSDIEDSEERGMGSDLQFMDEREDDSEEREVGSDLLDKKYREENSEERE
MVTDIYTDDRLLSEEEEAALREENEDDVEDPEVVEMGMFSGLSESESIPQSPQEEEEEEE
TTSLPWRRRLSLGKCPRGSKSGQRRFHHLPHPMAVDFGELNSLMASIMEAPTICSDCGES
FSPGTAFLQHQRMHRLAQAAAGVPPYGFTTECGGVVGMVGLGGAGPLASVLPRTPGEKPY
RCGECGKGFSRNTYLTNHLRLHTGERPNLCSDCGKSFSWRADLLKHRRLHTGEKPYSCPE
CGEAFSLSSHLLSHRRAHAAASGAGAAALRPFACGECGKGFMRRSHLANHQRIHTGEKPH
ACGDCGKRFSWRSDLVKHQRVHTGEKPYMCSECGETFSVSSHLFTHKRTHSGERPYVCGE
CGKGFGRNSHLVNHLRVHTGEKPFGCADCEKRFSDFSTLTQHQRTHTGEKPYACVECGKS
FIQSSHLIRHRRIHTGDKPHKCGGCGKGFRYKTHLAQHQKLHLC
Download sequence
Identical sequences F7AEC9
ENSMODP00000023297 ENSMODP00000023297

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