SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000028343 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000028343
Domain Number 1 Region: 577-634
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.88e-26
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 2 Region: 521-578
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.02e-24
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 3 Region: 353-410
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.38e-24
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 4 Region: 745-802
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.37e-24
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 5 Region: 409-466
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.39e-24
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 6 Region: 689-746
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.17e-23
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 7 Region: 2-55
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 2.75e-23
Family KRAB domain (Kruppel-associated box) 0.0013
Further Details:      
 
Domain Number 8 Region: 633-690
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.22e-23
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 9 Region: 465-522
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.34e-22
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 10 Region: 241-298
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.15e-21
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 11 Region: 801-857
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.45e-21
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 12 Region: 297-354
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.15e-21
Family Classic zinc finger, C2H2 0.0091
Further Details:      
 
Domain Number 13 Region: 192-242
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.49e-17
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Domain Number 14 Region: 146-187
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000847
Family Classic zinc finger, C2H2 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000028343   Gene: ENSMODG00000003482   Transcript: ENSMODT00000029925
Sequence length 866
Comment pep:novel chromosome:BROADO5:2:539372242:539378637:-1 gene:ENSMODG00000003482 transcript:ENSMODT00000029925 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MCLIQESVTFRDVAVDFTQEEWRHLEPAQRALYRDVMLENYENLVSVDSKPPSPSPIVDA
NLDMPSRLYPSKSLDHSSLTDGSLNSNLTKSICIDASSKKNLLKGKAWHCKMDETGEYEV
NLEKLKCNPERQSRKIIVIPRATFNKGNKHEYKQYGKLFSYIESLIKHKRTNIREKSYEC
NEFGKTFDEKGLIFHQGIHIRGKPFECNICDKAFREHGHLNRHQRIHAGEKHFECNECGK
TFSENRYFIGHKRIHTREKSFECNDCGKAFSIKQHLYRHQRVHTGEKPFECNECGKSFNR
RESLINHQKTHTKENLFACNECGKTFSDSQILKNHQDIHTGEKPFECNKCGKTFNERGRL
NRHQRIHTGEKPFECNECGKAFSESGHFIIHQRIHTGEKPFECNECGKTFSERGSLNRHQ
RIHTGEKPFECNECGKGFNRRENLISHQRTHSREKPFACNECGKTFSQRGNLTTHQRTHT
GEKPFACNKCGQACSQRASLIYHHRSHTGEKPFDCNECGKAFSERGNFIAHQRIHTGEKP
FECNECGKDFSRRENLISHQRTHTGEKPFECNECGKAFRQKGSLITHQRIHTGEKPFKCS
ECGKAFSVRGNLIAHQRTHTGEKPFTCNECGKAFSGRGYFITHQRTHTGEKPFPCNECGK
AFSERGSLTRHQRIHTGEKTFTCSECGKAFNQRASLITHHRTHTGEKPFSCNDCGKAFRR
RRNLITHQRSHTGDKPFVCSECGKAFSERGHLITHQRTHTGEKPFECNDCGKAFSEKGSL
NRHHRTHTGEKPFACKECGKAFSGRANLIRHERTHTGEKPFTCDCGKAFSGRANLVRHQR
SHTGERPFACNECGIAFSRKANLMSH
Download sequence
Identical sequences F7FBA9
13616.ENSMODP00000028343 ENSMODP00000028343 ENSMODP00000028343

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]