SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000006619 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000006619
Domain Number 1 Region: 117-501
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.9e-52
Family Branched-chain alpha-keto acid dehydrogenase PP module 0.0045
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000006619
Domain Number - Region: 684-720
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 0.00456
Family Branched-chain alpha-keto acid dehydrogenase Pyr module 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000006619   Gene: ENSOPRG00000007225   Transcript: ENSOPRT00000007229
Sequence length 920
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4465:131:102098:1 gene:ENSOPRG00000007225 transcript:ENSOPRT00000007229 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASAAVAAARRGINQAAPLLLRRGYQTERGVYGYRPRKPESQGPQGSLARHPXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNMGKEEASLEEIL
AYLNQIYCGQISIETSQLQNQEEKNWFAKRFEELKKEPFTTEERKHLSRLMLESQEFDHF
LTTKFATVKRYGGEGAESMMGFFHELLKTAAYSGITDVIIXXXXXXXXXXXXXXXXXXXX
LMFRKMQGLSEFPENLSAVGDVLSHLTSSVDLDFGAHSPLHVTMLPNHSHLEAVNPVAVG
KTRGRQQSRQDGDYSPDSSARPGDKVICLQVHGDASFCGQGIVPETLTLSNLPHFRIGGS
IHLIVNNQLGYTTPAERGRSSLYSSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQF
RKDVILDLLCYRXXXXXXXXXXXXXXXXXXXXXXARKSIPDTYAEHLITSGLMTQEEVSE
IKASYYAKLNDHLTNTTHYSPPATNLQAHWQGLVQPEARITTWNTGVPLDLLRFIGMKSV
EVLKELQVHSHLLKTYVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVRLSGQDVGRG
TFSQRHVMVVCQQTDDTYIPLNHMDPHQKGFLEXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXEAKWLLQSGIVILLPHGYDGAGPDHSSCRLERFLQX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXFIWSQEEPQNMGPWCFVSPRFEKQLACKLRLVSRPPLPAPA
VGIGTVHLQQHEHVLRETFA
Download sequence
Identical sequences ENSOPRP00000006619 ENSOPRP00000006619

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]