SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000008400 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000008400
Domain Number 1 Region: 238-330
Classification Level Classification E-value
Superfamily post-AAA+ oligomerization domain-like 3.32e-26
Family DNA polymerase III clamp loader subunits, C-terminal domain 0.00049
Further Details:      
 
Domain Number 2 Region: 41-134
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.3e-21
Family Extended AAA-ATPase domain 0.0000615
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000008400   Gene: ENSOPRG00000009179   Transcript: ENSOPRT00000009180
Sequence length 336
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_2171:565675:575179:1 gene:ENSOPRG00000009179 transcript:ENSOPRT00000009180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDSSAGQQXXXXXXXXXXXXXVEKSRPQTLDDLSHRDILSIQKFINEDRLPHLLLYGPPG
TGKTSTILACAKQLYRDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVI
LDEADAMTQDAQNARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTNMAFDKVTEETVYTCTGHPLK
SDIANILDWMLNQDFSTAYRNIMDLKTVKGLALQDILTEIHLFVHRVDFPSSVRIHLLTK
MADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVSEA
Download sequence
Identical sequences ENSOPRP00000008400 ENSOPRP00000008400

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]