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Domain assignment for LOC_Os03g06440.2|13103.m00709|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os03g06440.2|13103.m00709|protein
Domain Number 1 Region: 387-803
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.74e-59
Family Extended AAA-ATPase domain 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os03g06440.2|13103.m00709|protein
Sequence length 959
Comment RNA helicase SDE3, putative, expressed
Sequence
MGTYVRNYSDDEFSVAGEKPDVEFMDYQNDGSIQDYSLEDAPVVVTVPFPFIDGKPKSVL
VGETSADTISIENTSSEPVNLWSVRIFSSNPEDSYVLSMMKPPLNDTDEEAKRNFLGLTS
VEDRTLQPGQTLTIWLSCTPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSQALFSDKP
YSRKHTQKKKFECSSFVPGCRPTRQHSQGFKFKLPQFAIPADIRELIQSKQRPDVLSEEL
NMTNYAKFFSTLLVMEEINLEEEMRSYDMERILMRRRGLEFLSLEVPGLAEKRPSLVHGD
FIFVRHAGSDARPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQYDVSFTYNRLNMRRLYK
AIHEAELLGPDILFPCRSSSGSVKKGPFKPLNPHINTEQADAVATILGCRGVAPYVIYGP
PGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAA
SRQYEDVDPDFIRFCFFQDMVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIF
LDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFE
YEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF
PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKI
KKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVA
ITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLPPPEETQVSGFRDSQDEPA
RWGYNQQQESSANYSYKQDPHDSGSEHVNGLPSTENEVEWSEKTLNEEHQPCSSAAEADS
PEFMLKQKAEEEEHVEQDGVQPEQCPAKDNKLQDAYAAKYSFPPEWCDVSNIPATGWDD
Download sequence
Identical sequences Q10RG1
LOC_Os03g06440.1|13103.m00708|protein LOC_Os03g06440.2|13103.m00709|protein LOC_Os03g06440.1|PACid:21912049 LOC_Os03g06440.2|PACid:21912050 39947.LOC_Os03g06440.2 XP_015627764.1.37577 XP_015627765.1.37577

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