SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os12g39620.2|13112.m04116|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os12g39620.2|13112.m04116|protein
Domain Number 1 Region: 13-213
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.21e-28
Family ABC transporter ATPase domain-like 0.071
Further Details:      
 
Domain Number 2 Region: 349-572
Classification Level Classification E-value
Superfamily L domain-like 1.29e-27
Family Ngr ectodomain-like 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os12g39620.2|13112.m04116|protein
Sequence length 609
Comment disease resistance protein, putative, expressed
Sequence
MVLTYFVLVSVGYFSDRVFFETISQSANLDTIKMKLWEQISGNLVLGAYNQIPEWQLKLG
PRDKGPVLVILDDVWSLSQLEELIFKFPGCKTLVVSRFKFPSLVTRTYEMELLDEEAALS
VFCRAAFDQESVPRTADKKLVRQVAAECRGLPLALKVIGASLRDQPPKIWLSAKNRLSRG
ETISDSHETKLLERMAASIECLSGKVRECFLDLGCFPEDKKIPLDVLINIWMEIHDLDEP
DAFAILVELSNKNLLTLVNDAQNKAGDLYSSYHDFSVTQHDVLRDLALHMSGRDALNNRR
RLVMPRREESLPKDWQRNKDTPFEAQIVSIHTGEMKESDWFQMSFPKAEVLILNFASSVY
YLPPFIATMQNLKALVLINYGTISATLDNLSAFTTLSDLRSLWLEKITLPPLPKTTIPLK
NLRKISLVLCELTNSLRGSKVDLSMTFPRLSNLTIDHCIDLKELPSSICEISSLESISIS
NCHDLTELPYELGKLHCLSILRVYACPALWRLPPSVCSLKRLKYLDISQCVNLTDLPEEL
GHLTSLEKIDMRECSRLRSLPRSSSSLKSLGHVVCDEETALLWREAEQVIPDLRVQVAEE
CYNLDWLVD
Download sequence
Identical sequences H2KX58
LOC_Os12g39620.2|13112.m04116|protein LOC_Os12g39620.2|PACid:21936673

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]