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Domain assignment for LOC_Os03g42230.1|13103.m04546|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os03g42230.1|13103.m04546|protein
Domain Number 1 Region: 22-121
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.12e-23
Family B3 DNA binding domain 0.0022
Further Details:      
 
Domain Number 2 Region: 227-333
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.24e-18
Family B3 DNA binding domain 0.0053
Further Details:      
 
Domain Number 3 Region: 425-528
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.66e-18
Family B3 DNA binding domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os03g42230.1|13103.m04546|protein
Sequence length 536
Comment B3 DNA binding domain containing protein, expressed
Sequence
MAGSGSCMKKSCVCCQKYLEHLDGKMNCFVRRMTADSRRSMIMPCKFVNHFGGDFSGTIK
LQSPNGILYVVEVTKCKNKTVLRCGWEAFVDAHHIEENDSLLFRCVENSRFEVLIFDSDD
CEKVFSCAGIRNTCKSIQEKSSSSCDDTAESSESEGFARNQKGSFSHRRKTANLASSSED
SGEDSPSEHESVESGDLETSQEPYVLSRRSYLSEFQKEKVDALIQEIQPETTAFVAIMRK
SNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYKRKDARMNILRGSWVE
FVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVAAAYSWGGTGVDRAGSSLGRTDVKSA
SEISIKEEPIDQEENVSSRNRNGVSDESEEDEDSEGPAHPPYIVPCKSHLSRLQKKIVEE
KVRSFQSKFPVYVAIMKKSNVERSASRCQLELGARFAAAVHLPDRRQTVVLQRRGERWAT
VMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERWRLTMAVHAIFREQCC
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Identical sequences Q6AV22
LOC_Os03g42230.1|PACid:21912291 XP_015633049.1.37577 XP_015633050.1.37577 39947.LOC_Os03g42230.1 LOC_Os03g42230.1|13103.m04546|protein

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