SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Ost9901_3|93903|ost_17_001_011 from Ostreococcus lucimarinus CCE9901

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Ost9901_3|93903|ost_17_001_011
Domain Number 1 Region: 301-434
Classification Level Classification E-value
Superfamily TPR-like 0.0000443
Family CT2138-like 0.086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Ost9901_3|93903|ost_17_001_011
Sequence length 442
Sequence
MAGGYVPPHARRGKNASSSASTTIASPTLDAFERELRAASKRISRAETAEEGLALYARTL
ENLRAFVASSSQDERGDEARVSLANAALEYAGEIMRVERRKALSTTTRADEARTKERAIS
CAQDALRAFEGLSGSPLEKANGVATALSRIVELGGGGDNAAEVSATLARAVEMYDYCATS
IENSQAHEDVMPALWNCADARLKVAEHRAETGDVDGASTSYRESFSLYERACGFCDANRG
DDLSGLLYDWGCSLTSYALFLAQSLDASEDAVRIADAAVEKLRAAGQFAIGDVGALNALG
DAYQTKAEILSRFDDAAPAVDSLRLAICEAYDVALKLNSTELNSTIGRGEAHMALAALFR
RSGDHARADEASDTAWKAYDKALKLGDKNDPGTCEERFEVVYNAACAANRAGQRDAARHL
LSQLLLCDGTTQEAIDNDPDLK
Download sequence
Identical sequences A4S9I2
436017.A4S9I2 XP_001422070.1.19716 jgi|Ost9901_3|93903|ost_17_001_011

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]