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Domain assignment for gi|46446626|ref|YP_007991.1| from Candidatus Protochlamydia amoebophila UWE25

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|46446626|ref|YP_007991.1|
Domain Number 1 Region: 196-491
Classification Level Classification E-value
Superfamily RNI-like 4.32e-51
Family Cyclin A/CDK2-associated p19, Skp2 0.051
Further Details:      
 
Domain Number 2 Region: 469-567
Classification Level Classification E-value
Superfamily RNI-like 6.36e-23
Family 28-residue LRR 0.024
Further Details:      
 
Domain Number 3 Region: 85-160
Classification Level Classification E-value
Superfamily POZ domain 0.000000011
Family Tetramerization domain of potassium channels 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|46446626|ref|YP_007991.1|
Sequence length 583
Comment hypothetical protein pc0992 [Candidatus Protochlamydia amoebophila UWE25]
Sequence
MNISNFGFNPSHLVHTTTPSYDPPQQDINDQLENENTPLDNSLPNLEETSAPTIPASALS
PSSEEIQLNFHEGTSLTISHSQLALLRDKSLYFKTLWSGNFQETLQHPLDLTKKDFTLLL
NYLANPKFEIPLEEISSSIQLADYYGLTEVVKHLEEQLIDGYKSQRFEPFNSTEESLVRL
KEILNFAQQYQLNALKNYLEFTAVSALLNQTIQLAEFEKIINHFSNEIEALDFSNNAHLT
DAHLLALKNCENLKVLHLEACLAITDDGLAHLAPLVALQHLDLSDCENLTDVGLAHLTPL
TALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLTPLTALQHLDLRGC
YLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLRPLTALQHLNLNWCRNLTDAGLAHL
TPLTALQHLDLSFCSNITDDGLAHLTLLTTLQHLNLSGCYKLTDAGLAHLTLLTGLQHLN
LNWYKNLTDAGLAHLTPLAGLQYLALTDCKNLTDAGLAHLTPLTALQHLNLSGCYKLTDA
GLAHLTSLTALQYLDLSYCMNLTDDGLDRFKTLATSLNLEIIR
Download sequence
Identical sequences Q6MCI3
gi|46446626|ref|YP_007991.1| WP_011175542.1.90613 264201.pc0992

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