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Domain assignment for Carubv10004222m|PACid:20894891 from Capsella rubella v183

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Carubv10004222m|PACid:20894891
Domain Number 1 Region: 30-173
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 8.89e-48
Family B3 DNA binding domain 0.0052
Further Details:      
 
Domain Number 2 Region: 630-710
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000226
Family PB1 domain 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Carubv10004222m|PACid:20894891
Sequence length 742
Sequence
MHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFS
VPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK
RLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCF
TVFFHPRASPSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLD
TVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHAGTSS
LPDGRGELGSGLTWLRGGGGDQQGLLPLNYPSVGLFPWMQQRLDLTQMGTDNNQQYQAML
AAGLQNIGGGDPLRQQFVQLQEPHHQYVQQSASHNSDLMLQQQQQQQQQQASRHAMHAQT
QVMSENIPQQNMRQEVSNHPTGQQLQQPDQNAYLNAFKMQNGHLQQWQHQEMASPSFMKS
DFTDSSNKFATSATPMQQNAASPASNDGSNLLNFSITGQSVLPEQLTTEGWSPKASNTFS
EPLSLPQAYPGKSLALEPGNPNLNPQNPSLFGVDPDSGLFLPSTVPRFASSSGDAEASPM
SLTDSGFQNSLYGCMQDTTHELLHGAGQINPSNQTKNFVKVYKSGSVGRSLDISRFSSYH
ELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPED
VQQMGDQGEGSAGSFPQNPTHL
Download sequence
Identical sequences R0GVY9
Carubv10004222m|PACid:20894891 XP_006282445.1.15642

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