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Domain assignment for Carubv10007553m|PACid:20893672 from Capsella rubella v183

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Carubv10007553m|PACid:20893672
Domain Number 1 Region: 8-109
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.85e-22
Family B3 DNA binding domain 0.0034
Further Details:      
 
Domain Number 2 Region: 130-210
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.55e-18
Family B3 DNA binding domain 0.0056
Further Details:      
 
Domain Number 3 Region: 249-331
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000000000275
Family B3 DNA binding domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Carubv10007553m|PACid:20893672
Sequence length 347
Sequence
MADPVLQSPENPHFFKVLLPGFDSNLNIPMKFFSAYIEGRYEGKTVELESDASEKSWKVE
MEGRRLTFGWKEFASSHDLRIGDVIIFRHQGALLFHVACFGPSCCEIQYRQSCNDDDHLY
DDQENLSKLSSVHGIHILFFPKKFATSGALIKGSNNIVLMNEVAKKWRLILKFRESSRTF
YMRDGWRSFCHENGLKPGDAVTFELESNNLKTPLLRFSTAEFTSVSTKDCNKLGKINKSG
DSQKVSSSSSVTHLPKNFVKVNRMENLARRKITLLDKHGKDWAVTLVRERRNTQTRLGFG
LKDFFKANGTKANESLVFELVWEDKTTLPLLRFCSNAKTYSKLRPSY
Download sequence
Identical sequences R0H2N7
Carubv10007553m|PACid:20893672 XP_006286022.1.15642

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