SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Gorai.004G158900.8|PACid:26775347 from Gossypium raimondii v221

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Gorai.004G158900.8|PACid:26775347
Domain Number 1 Region: 77-147
Classification Level Classification E-value
Superfamily Skp1 dimerisation domain-like 3.66e-17
Family Skp1 dimerisation domain-like 0.00057
Further Details:      
 
Domain Number 2 Region: 3-67
Classification Level Classification E-value
Superfamily POZ domain 0.00000000188
Family BTB/POZ domain 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Gorai.004G158900.8|PACid:26775347
Sequence length 335
Sequence
MKSYIWLQTVDGSIQQVEQEIAMFCPMICHEVIQKGMGSSKNYAISLPQQVNPAMLSLIL
DYCRFHQVPGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG
KAPEEIREIFHLPDDLTEEEKLEPLKNATDDPRIRLLNRLYAKKRKELKEREKLKNVEVD
EELVDDRSVDDLLSFINGDDGDSKGIKTSKSKKKNRRRKDLLKSTSAHEATKNHNKESNG
LNSVCRSAEVGQILPGVGATTNLQDVEDDIFPNKNEFDDGDIDDEIDPTLKEKIDREVED
FARRLNSDWPERMQEILSLGQEKKPVHLSLNGKGS
Download sequence
Identical sequences A0A0D2MZ09 A0A1U8IVJ9
Gorai.004G158900.8|PACid:26775347 XP_012475221.1.20347 XP_016682125.1.88148

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]