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Domain assignment for PGSC0003DMP400012000 from Solanum tuberosum

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PGSC0003DMP400012000
Domain Number 1 Region: 153-420
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.16e-63
Family Extended AAA-ATPase domain 0.035
Further Details:      
 
Domain Number 2 Region: 486-867
Classification Level Classification E-value
Superfamily L domain-like 8.16e-31
Family Polygalacturonase inhibiting protein PGIP 0.026
Further Details:      
 
Domain Number 3 Region: 853-1152
Classification Level Classification E-value
Superfamily RNI-like 7.53e-23
Family 28-residue LRR 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PGSC0003DMP400012000
Sequence length 1162
Comment PGSC0003DMT400017462
Sequence
MTEILYTLAAEILMKLGSLAAHELGSLWGLKDDLSKLRDTVSAMEAVFLDVEEKQGDSRE
VKNWVRKLRAVFFEADDLLDDFYTEITRRNLLMQKNPSKKISIFFSKSNPVLYSLEIHQR
LKVIRRKLEAIEKDKHMLHLVEKQVVDFELPDRETHSFVNVDEVIGREDEKRVTVDRLLD
VRENVCVVPIIGIGGLGKTTLAQLVYNEDRVKKHFDLRIWVFVSHIFNVKLIVEKMIESI
TGMKPQSLHFDRLQDQLRKEIDGKKYLLVLDDMWNENREIWLKLQDLLIGGARGSKVLVT
TRSGLVAAAMGTAPPCNLKGLPEDMSWSLFSKLAFKPGEEINSSLVAIGKEILRKCAGVP
LAIRILGSFLYYKETEAEWLYVKNHQLTDMAESADIEILPILKLSYDNLPIHLKHCFSYC
SIFQKNQTISKKTLIQLWIAQGFIRSNDEENECQEDVGERYFMGLLRRSFFQDVKEHRLG
DIISCKMHDLIHDLAKMVAENETLMLTSAGNKSSVNICHLSVGPVHDSAWELPHSLLKEK
NLRTFLMPIASRDYLKSGRFIGSEKQSKSVVDAVISNFRSLRVLDLHGLGINEVPGSVSM
LKHLRYIDLSENNFVTLPKSMSKLLNLQTLKLSYCFDLCELPENIHKMVNIRHLELDGCL
NLSKMPCGIGQLTALRTLSQFVIGQETSTSSKVNAVLTDLNGLVKLRGKLTLRNLGCIEC
LCPKINDAVLKNKEYLQSLRLEWTYEAVNDEYDELLLEGLQPHENLKVLFIERYGGQSFP
KWMMVGLHSSLPKLTKLTLKNLKVCKSLPPFGCLPSLQSLKLENLTLLEYIEHTSYDGSQ
FGMELQKGSAMYFPSLKELKLCNLPCLKGWWKKEVMAGSESSSFPNRLLLSSFPSLSKLT
IQDCLMLEFMPINPRLEELNLIRVGNKLLQQLMMLLETTLSANCSSFLAVSKLKSLYILD
VRELFLLPEGLQNLSRLDHLEINGCPNLLSLPIEGMRALNMLRFLHVHDCGLTSLFQAIK
HLYALETLVISSCKEMNLSTDNDQEYLQFEGLKSLHTVYIQEIPKLVHLPVWLQYLPSLR
ALHIEKCYSLLDLPDWISDLKSLHALFIYKCPKLTSIPAGMVHLTSLEELRILMCPNLWT
CCQNEQGEDWPKIAHIPKVIVK
Download sequence
Identical sequences M1A8Z3
XP_006345413.1.80749 XP_006345414.1.80749 PGSC0003DMP400011999 PGSC0003DMP400012000

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