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Domain assignment for PGSC0003DMP400025036 from Solanum tuberosum

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PGSC0003DMP400025036
Domain Number 1 Region: 621-937
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.25e-75
Family Extended AAA-ATPase domain 0.0000000367
Further Details:      
 
Domain Number 2 Region: 285-541
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.63e-60
Family Extended AAA-ATPase domain 0.000000287
Further Details:      
 
Domain Number 3 Region: 94-238
Classification Level Classification E-value
Superfamily Double Clp-N motif 8.73e-16
Family Double Clp-N motif 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PGSC0003DMP400025036
Sequence length 965
Comment PGSC0003DMT400036893
Sequence
MELSCSSPLSVNSTISFNRYVSVYPHRRCQSVLSLFPYCPPPSSHVATTATASAACSTSS
STSTLFGISLSHRPSSSVSRKIKRSLYIVSGVFERFTERSIKAVMFSQKEAKALGKDMVN
TQHLLLGLIAEDRSPGGFLGSRITIDKAREAVRSIWLGDSEDDTAKLGSQDSASATSATD
VAFSSSTKRVFEAAVEYSRTMGYNYIAPEHIAIGLFTVDDGSAGRVLKRLGANVNRLAAE
AVSRLQGELAKDGRDPISFKRSREKSFPGKITIDRSAEQAKAEKNALEQFCVDLTARASE
GLIDPVIGRETEVQRMIEILCRRTKNNPILLGQAGVGKTAIAEGLAINIAEGNIPAFLMK
KRVMSLDIGLLISGAKERGELEARVTTLIKDVKESGHIILFIDEVHTLVGAGTVGRGNKG
SGLDIANLLKPTLGRGELQCIASTTMDEFRLHIEKDKAFARRFQPILINEPSQADAVQIL
LGLREKYESHHKCRYSLEAINAAVELSSRYIPDRYLPDKAIDLIDEAGSKSRMQAHKRRK
EQQISVLSQSPSDYWQEIRAVQTMHEVILASKLTGNDDVSRLDDDSELHLQPASSSTSDE
HEPPLVGPEEIAAVASLWTGIPLKQLTVDERMLLVGLDEQLKKRVVGQDEAVTSICRAVK
RSRTGLKHPNRPISAMLFCGPTGVGKSELAKALAASYFGSESAMLRLDMSEYMERHTVSK
LIGSPPGYVGYGEGGTLTEAIRRKPFTVVLLDEIEKAHPDIFNILLQLFEDGHLTDSQGR
RVSFKNALIVMTSNVGSTAIVKGRQNTIGFLLADDESAASYAGMKAIVMEELKTYFRPEL
LNRIDEVVVFRPLEKPQMLEILNLMLQEVRARLVSLGISLEVSEAVMDLICQQGFDRNYG
ARPLRRAVTQMVEDLLCESVLSGDFKPGDVAMIHLDESGNPVVINQSSQSIQLSDTNGNP
VVTNR
Download sequence
Identical sequences M1B4G3
XP_006341443.1.80749 PGSC0003DMP400025036

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