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Domain assignment for PGSC0003DMP400053466 from Solanum tuberosum

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PGSC0003DMP400053466
Domain Number 1 Region: 159-379
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.37e-46
Family Extended AAA-ATPase domain 0.068
Further Details:      
 
Domain Number 2 Region: 574-966
Classification Level Classification E-value
Superfamily RNI-like 5.26e-42
Family Cyclin A/CDK2-associated p19, Skp2 0.0079
Further Details:      
 
Domain Number 3 Region: 3-131
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 2.62e-38
Family Toll/Interleukin receptor TIR domain 0.0032
Further Details:      
 
Domain Number 4 Region: 357-459
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00000000000354
Family Rad21/Rec8-like 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PGSC0003DMP400053466
Sequence length 1093
Comment PGSC0003DMT400078881
Sequence
MASSSQYCPRWKYDVFLSFRGEDTRKTFTSHLYEGLRNRGIFTFQDDKRLEHGDSIPQEL
LKAIIESQVALVVFSKNYATSRWCLNELEKIMECKSENGQMVIPVFYDVDPSHKVQGWRT
VLTAAANLKGYDIRDGIESENIQQIVNYISSKLCKIAYSSSSLQDIVGINAHLEKVKSLL
KIEIDDVRMVGIWGIGGVGKTTIAKAIFDTLSYQFEAACFLEDVKENATKSQLHSLQNTL
LSELLRQKYDYANDKYCGKRLISRVVVTTRNRHLIEKDDAIYEVPTLPDHESMELFNQHA
FKKEVPDERFKNFSLEVVNHAKGLPLALKVWGSLLHKKSLTQWRSTVDQIKKNSSSEIVK
KLKISYDGLEPEEQKIFLDMACFFRGDEKKVVIEILESCDFGAEYGLDVLIDKSLVNISK
NDRVEMHDLIQDMGRYVVKMQKDSGKQSRLWDAEDFEEVMVNNTGTKSMEAIWLQRIQKL
RFSKKAMKKMIKLRILHIGHFVPDQLFALANDDSIEYLPNSLCWFDWHGYPWESLRENFE
PKGLVHLDLQYSFLHHLWIGTKHLPFLRKLNLSFSGSLRWTPDFTGMPNLEYLNLMECKS
LEEVHHSLGCCSKLIELDLDGCKILKKFPCVNGESLESLYLYGCSSLEEFPEILGRIKPG
LEIKVKRSGIRELPSSIQYLTHITKLDLSSLENLVTLPSSICKLKGLMELNVSYCLKLES
FPEEIGDLENLKELHATFTQISRPPSSIVRLNKLKSLTFQKSEVGLEDRVLFVFPQVNEG
LSLLDVLRLDYCNLIDEGLPEDIGCLSSLKMLNLSGNNFKHLPRSIAQLGALQSLDLSYC
KRLKELPDFMEMQNLKTLNLSYCKNLEEVHHSVRFLKNLHTLILTNCIQLKRFPGLCIDS
LRYLCLRGCSSLEKFPKFLRNTIVESEIYMLENVMRELEFPLTFSQEIVSLSQRVFSIVL
GGNKFSLQQIPSWFHHRGMDKSVSVNLPENWYVPDNFLGFAVCYSGRLADYTTAHLIPLC
DDDGMPWKLDFFYLPEGRGRFSTIHLFLLPLASLWDTSKANGKTPNDYGLIRLCFKSKIK
RTNFCLRYYVSQS
Download sequence
Identical sequences M1D0W4
PGSC0003DMP400053466

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