SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for PGSC0003DMP400063871 from Solanum tuberosum

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PGSC0003DMP400063871
Domain Number 1 Region: 76-304
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.09e-60
Family G proteins 0.000000149
Further Details:      
 
Domain Number 2 Region: 376-476
Classification Level Classification E-value
Superfamily EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 6.96e-34
Family EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 0.0000157
Further Details:      
 
Domain Number 3 Region: 283-379
Classification Level Classification E-value
Superfamily Translation proteins 1.81e-29
Family Elongation factors 0.000017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PGSC0003DMP400063871
Sequence length 477
Comment PGSC0003DMT400092196
Sequence
MASISAASATAAAASTKINTSGGSVLPSKSSKLILSSSFTPTPSTLFLHSPATTTPSSST
RHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSTPKKYDEIDA
APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP
MPQTKEHILLAKQVGVPNMVVFLNKEDQVDDEELLELVELEVRELLSSYEFPGDDIPIHC
GSALLALEALMANPSIKRGDDQWVDKIYKLMDSVDEYIPIPQRQTELPFLMAIEDVFSIT
GRGTVATGRVERGTVKTGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGI
QKIDIQRGMVLAKPGSITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV
TAIMTDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE
Download sequence
Identical sequences M1DPA6
XP_006347424.1.80749 PGSC0003DMP400063871

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]