SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|474979336|ref|YP_007689802.1| from Streptomyces hygroscopicus subsp. jinggangensis TL01

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|474979336|ref|YP_007689802.1|
Domain Number 1 Region: 35-345
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.22e-55
Family Phosphate binding protein-like 0.00077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|474979336|ref|YP_007689802.1|
Sequence length 351
Comment putative ABC transporter substrate-binding protein [Streptomyces hygroscopicus subsp. jinggangensis TL01]
Sequence
MPRNRAPLAVVLALLAGPALSACGGSSAASDARAVTVYSADGLKGENGDGWYDQVFEDFE
KQTGIKVRYVEGGSGEMVQRAVRERGNPQADVLVTLPPFIQQAAGRGLLQKYAPSGADQV
AGADKAPDGTWTSVVNNYFGFVYNKKELKQPPRTWDELLGSRYKNKIQYSTPGVAGDGTA
VLVKAMHDFGGKEQALAYLKKLQGNNVGPSASTGKLAPKVDKGELLVANGDVQMNHAQTR
TMPNLGIWFPAGTDGRPTTFALPYTAGLVAKAPHSAHGRKLLDFMLAREQQEEVSAIGGD
FTARRDVKATDANATALTRLMDGIEVFEPDWNDIDKNLGAYVEDWKSATGS
Download sequence
Identical sequences H2JV47
gi|474979336|ref|YP_007689802.1| WP_014669592.1.21199 WP_014669592.1.57224 gi|386837061|ref|YP_006242119.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]