SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 3c6q_B from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  3c6q_B
Domain Number 1 Region: 3-292
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.36e-69
Family SCOPe 0.00000000217
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3c6q_B
Sequence length 311
Comment mol:protein length:311 Sugar ABC transporter, periplasmic sugar-binding protein
Sequence
mltigvigksvhpywsqveqgvkaagkalgvdtkffvpqkcdinaqlqmlesfiaegvng
iaiapsdptaviptikkalemgipvvtldtdspdsgryvyigtdnyqagytaglimkell
ggkgkvvigtgsltamnslqriqgfkdaikdseieivdilndcedgaravslaeaalnah
pdldaffgvyayngpaqalvvknagkvgkvkivcfdttpdilqyvkegviqatmgqrpym
mgylsvtvlylmnkigvqntlmmlpkvkvdgkvdyvidtgvdvvtpenldeylkkmeelg
ipikfhhhhhh
Download sequence
Identical sequences 3c6q_A 3c6q_B 3c6q_C 3c6q_D

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]