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Domain assignment for 4rk9_B from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  4rk9_B
Domain Number 1 Region: 16-394
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.96e-82
Family SCOPe 0.0000000629
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 4rk9_B
Sequence length 401
Comment mol:protein length:401 Carbohydrate ABC transporter substrate-binding protein MsmE
Sequence
SMAGCSGKNAGKSGDVTLTMFSTMTNDSEKNTLRSIADDFEKENEGIKIDISFPGPDYEN
MLRVKMAANDMPDLFDTHGWAKIRYGEYTADLKDMDWVKHLDPNLDPILKDEKGKVYAYP
FNQAKDGIVYNAGLLKKYGLKPPQTLDELMHALETIKEKSNGSVIPFWFAGSDKGALAQF
YDQLATPLLITDDRRNEKKALENGTFDWSDYTLLAETFKEMQEKQLINKDILTAKPSQLV
ELMAQEKIGFTLSVTSIGPDTREVNPDIQLGVMPTPAVYEGDKPSWIGGERHTVAVWKDS
EHLEEAKRFIEFAAQPKYVKKIAEATSFPQALTNTEAENYYSKFYDQYEEIKIEPYFDRV
YLPSGMWDVMGTTGQELLAGTLTPKQVSEKMKQEYSRLQEQ
Download sequence
Identical sequences 4rk9_A 4rk9_B

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