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Domain assignment for 5aji_E from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5aji_E
Domain Number 1 Region: 181-278
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 2.49e-33
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.00000156
Further Details:      
 
Domain Number 2 Region: 28-112
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 2.42e-17
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.00000991
Further Details:      
 
Domain Number 3 Region: 114-179
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 1.63e-16
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.0000224
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5aji_E
Sequence length 286
Comment mol:protein length:286 SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL
Sequence
medlnvvdsingagswlvanqalllsyavnivaalaiiivgliiarmisnavnrlmisrk
idatvacflsalvrygiiaftliaalgrvgvqtasviavlgaaglavglalqgslsnlaa
gvllvmfrpfrageyvdlggvagtvlsvqifsttmrtadgkiivipngkiiagniinfsr
epvrrnefiigvaydsdidqvkqiltniiqsedrilkdremtvrlnelgassinfvvrvw
snsgdlqnvywdvlerikrefdaagisfpypqmdvnfkrvkedkaa
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Identical sequences 4age_A 4age_B 4age_C 4age_D 4age_E 4age_F 4age_G 5aji_A 5aji_B 5aji_C 5aji_D 5aji_E 5aji_F 5aji_G

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