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Domain assignment for 5lgn_A from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5lgn_A
Domain Number 1 Region: 106-504,585-590,621-663
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 5.3e-96
Family FAD-linked reductases, N-terminal domain 0.00000000000069
Further Details:      
 
Domain Number 2 Region: 13-96
Classification Level Classification E-value
Superfamily Homeodomain-like 3.42e-35
Family SWIRM domain 0.00000419
Further Details:      
 
Domain Number 3 Region: 489-597
Classification Level Classification E-value
Superfamily FAD-linked reductases, C-terminal domain 1.24e-30
Family L-aminoacid/polyamine oxidase 0.00000057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 5lgn_A
Sequence length 670
Comment mol:protein length:670 Lysine-specific histone demethylase 1A
Sequence
PSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLT
FEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSG
LAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVN
MELAKIKQKCPLYEANGQADDVKVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPV
SLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEAS
EVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDR
QILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKL
NTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEW
KTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLAL
VAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAA
GSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA
DQFLGAMYTL
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Identical sequences 5lgn_A

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