SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 6cd1_F from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  6cd1_F
Domain Number 1 Region: 9-404,431-453
Classification Level Classification E-value
Superfamily PLP-dependent transferases 3.17e-282
Family GABA-aminotransferase-like 0.0000103
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 6cd1_F
Sequence length 455
Comment mol:protein length:455 Serine hydroxymethyltransferase
Sequence
SNAFLDYGLSEADPDVHAIINKEKDRQFRSLELIASENFTSKAVMEAVGSCLTNKYSEGL
PGKRYYGGNEHIDELEILCQQRALAAFHLDGDKWGVNVQPLSGSPANFAVYTAILKPHDR
IMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGVIDYDMLEKTAALFRPKL
IIAGASAYPRDIDYARFRKIADSVGAFLMMDMAHVSGLIAASVLADPFEFVDIVTTTTHK
SLRGPRGGMIFFKKDAVHGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSPDFKN
YQNQVVANCRALANRLVEHEYKLVSGGSDNHLVLVDLRPSGIDGARVEKILDMASITLNK
NSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFELIADLIHEGVRISLEAKSLVSGTKVQD
FLNFVLAPEFPLGDKVSNLRRKVEALATQYPIPGV
Download sequence
Identical sequences 6ccz_A 6ccz_B 6cd0_A 6cd0_B 6cd0_C 6cd0_D 6cd1_A 6cd1_B 6cd1_C 6cd1_D 6cd1_E 6cd1_F 6cd1_G 6cd1_H

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]