SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 1qpz_A from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1qpz_A
Domain Number 1 Region: 58-331
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.87e-119
Family L-arabinose binding protein-like 0.00000000297
Further Details:      
 
Domain Number 2 Region: 2-46
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 2.73e-22
Family GalR/LacI-like bacterial regulator 0.00038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 1qpz_A
Sequence length 340
Comment mol:protein length:340 PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
Sequence
atikdvakranvstttvshvinktrfvaeetrnavwaaikelhyspsavarslkvnhtks
igllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllv
mcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghrei
gvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrpt
avfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgeta
fnmlldrivnkreepqsievhprlierrsvadgpfrdyrr
Download sequence
Identical sequences 1qpzA 1bdi_A 1pnr_A 1qp0_A 1qp4_A 1qpz_A 1wet_A 1zay_A

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]