SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|28872119|ref|NP_794738.1| from Pseudomonas syringae pv. tomato str. DC3000

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|28872119|ref|NP_794738.1|
Domain Number 1 Region: 52-459
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 3.42e-132
Family TK-like PP module 0.000000000132
Further Details:      
 
Domain Number 2 Region: 465-692
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 3.27e-97
Family TK-like Pyr module 0.0000000539
Further Details:      
 
Domain Number 3 Region: 693-879
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 4.08e-60
Family Transketolase C-terminal domain-like 0.00000167
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|28872119|ref|NP_794738.1|
Sequence length 881
Comment pyruvate dehydrogenase, E1 component [Pseudomonas syringae pv. tomato str. DC3000]
Sequence
MQDLDPVETQEWLDALESVLDKEGEDRAHYLMTRLGELATRSGSQLPYAITTPYRNTIPV
THEARMPGDLFMERRIRSLVRWNALAMVVKTNIGDPDLGGHISSFASSATLYDIGFNYFF
QAPTDEHGGDLIYFQGHASPGVYARAFLEGRITEDQMNNFRQEVDGKGLSSYPHPWLMKD
FWQFPTVSMGLGPIQAIYQARFMKYLEHRGYIPEGKQKVWCFLGDGETDEPESLGAIALA
GREKLDNLIFVVNCNLQRLDGPVRGNAKIIQELEGVFRGAQWNVTKVIWGRFWDPLLAKD
VDGILQRRMDEVIDGEYQNYKAKDGAFVREHFFNSPELKAMVADLSDDEIWKLNRGGHDP
YKVYAAYHEAVNHKGQPTVVLAKTIKGYGTGAGEAKNTAHNTKKVDVDSLRHFRDRFDIP
VKDAELEALPFYKPEEGSAEARYLSERRAALGGFVPQRRAKSFNLPTPPLDTLKAILDGS
GDREISTTMAFVRILTQLVKDKEVGQRIVPIIPDEARTFGMEGMFRQLGIYSSVGQLYEP
VDKEQVMFYREDKKGQILEEGINEAGAMSSFIAAGTSYSSHNQPMIPFYIFYSMFGFQRI
GDLAWAAGDSRTRGFLIGGTAGRTTLNGEGLQHEDGHSHILASTIPNCRTFDPTYGYELA
VIIQDGMRLMFEEQQDVFYYLTVMNESYAQPAMPAGVEAGIVKGMYLLEEDTREAAHHVQ
LLGSGTILREVREAAKILRDEFNIGADVWSVTSFNELRRDGLAVERNNRLHPGQKPELSY
VEQCLNGRKGPVIASTDYMKLFADQIRQWVPTKEYKVLGTDGFGRSDSRKKLRHFFEVDR
HFVVLAALEALADRGDIEPKVVAEAIVKFGIDPEKRNPLDC
Download sequence
Identical sequences A0A099SY82 A0A0E2UH79 A0A0K1DW60 A0A0N0WW51 A0A0P9LTR8 A0A0Q0DYS2 A0A0W0PKC1 A0A1H3HBX3 A0A2K4TC81 A0A2K4VNE7 F3ICA7 Q87VD4
NP_794738.1.37326 WP_003377141.1.101050 WP_003377141.1.101089 WP_003377141.1.101562 WP_003377141.1.10813 WP_003377141.1.11179 WP_003377141.1.11497 WP_003377141.1.11501 WP_003377141.1.12126 WP_003377141.1.13399 WP_003377141.1.13535 WP_003377141.1.14276 WP_003377141.1.14609 WP_003377141.1.14773 WP_003377141.1.14805 WP_003377141.1.15002 WP_003377141.1.15140 WP_003377141.1.15376 WP_003377141.1.17870 WP_003377141.1.18573 WP_003377141.1.18673 WP_003377141.1.1913 WP_003377141.1.19280 WP_003377141.1.2043 WP_003377141.1.20801 WP_003377141.1.21006 WP_003377141.1.2158 WP_003377141.1.22256 WP_003377141.1.2278 WP_003377141.1.23399 WP_003377141.1.25273 WP_003377141.1.25447 WP_003377141.1.25462 WP_003377141.1.25719 WP_003377141.1.25763 WP_003377141.1.25769 WP_003377141.1.25775 WP_003377141.1.26104 WP_003377141.1.26792 WP_003377141.1.27572 WP_003377141.1.28009 WP_003377141.1.29094 WP_003377141.1.29938 WP_003377141.1.3107 WP_003377141.1.31627 WP_003377141.1.32392 WP_003377141.1.33925 WP_003377141.1.34155 WP_003377141.1.34243 WP_003377141.1.34940 WP_003377141.1.36147 WP_003377141.1.36658 WP_003377141.1.37064 WP_003377141.1.381 WP_003377141.1.38291 WP_003377141.1.39561 WP_003377141.1.39745 WP_003377141.1.39752 WP_003377141.1.41250 WP_003377141.1.42260 WP_003377141.1.42849 WP_003377141.1.43260 WP_003377141.1.43547 WP_003377141.1.43591 WP_003377141.1.45049 WP_003377141.1.45653 WP_003377141.1.47589 WP_003377141.1.49357 WP_003377141.1.49996 WP_003377141.1.50205 WP_003377141.1.50828 WP_003377141.1.51453 WP_003377141.1.52 WP_003377141.1.52448 WP_003377141.1.52606 WP_003377141.1.53172 WP_003377141.1.53930 WP_003377141.1.54220 WP_003377141.1.54854 WP_003377141.1.56223 WP_003377141.1.58187 WP_003377141.1.58347 WP_003377141.1.58792 WP_003377141.1.60335 WP_003377141.1.60779 WP_003377141.1.60793 WP_003377141.1.6181 WP_003377141.1.61888 WP_003377141.1.62649 WP_003377141.1.64333 WP_003377141.1.65245 WP_003377141.1.65278 WP_003377141.1.66425 WP_003377141.1.6906 WP_003377141.1.6959 WP_003377141.1.69607 WP_003377141.1.69650 WP_003377141.1.69804 WP_003377141.1.69908 WP_003377141.1.71514 WP_003377141.1.7265 WP_003377141.1.74383 WP_003377141.1.7489 WP_003377141.1.75381 WP_003377141.1.77084 WP_003377141.1.77888 WP_003377141.1.78346 WP_003377141.1.78642 WP_003377141.1.79158 WP_003377141.1.79551 WP_003377141.1.80269 WP_003377141.1.80453 WP_003377141.1.80878 WP_003377141.1.8158 WP_003377141.1.82522 WP_003377141.1.82596 WP_003377141.1.83999 WP_003377141.1.85088 WP_003377141.1.87092 WP_003377141.1.87287 WP_003377141.1.87724 WP_003377141.1.91712 WP_003377141.1.91766 WP_003377141.1.92016 WP_003377141.1.92448 WP_003377141.1.92774 WP_003377141.1.93050 WP_003377141.1.95348 WP_003377141.1.95779 WP_003377141.1.96947 WP_003377141.1.97987 WP_003377141.1.99297 223283.PSPTO_5005 gi|28872119|ref|NP_794738.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]