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Domain assignment for gi|150377820|ref|YP_001314415.1|NC_009621 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|150377820|ref|YP_001314415.1|NC_009621
Domain Number 1 Region: 7-190
Classification Level Classification E-value
Superfamily Methylesterase CheB, C-terminal domain 7.85e-50
Family Methylesterase CheB, C-terminal domain 0.0004
Further Details:      
 
Domain Number 2 Region: 271-447
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 2.38e-45
Family Chemotaxis receptor methyltransferase CheR, C-terminal domain 0.00039
Further Details:      
 
Domain Number 3 Region: 826-954
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 3.38e-20
Family Heme-binding PAS domain 0.029
Further Details:      
 
Domain Number 4 Region: 200-273
Classification Level Classification E-value
Superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain 0.0000000000000011
Family Chemotaxis receptor methyltransferase CheR, N-terminal domain 0.0055
Further Details:      
 
Domain Number 5 Region: 733-835
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.000000000242
Family Flavin-binding PAS domain 0.074
Further Details:      
 
Domain Number 6 Region: 601-723
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0000628
Family FCH domain 0.02
Further Details:      
 
Weak hits

Sequence:  gi|150377820|ref|YP_001314415.1|NC_009621
Domain Number - Region: 1038-1146
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.00011
Family Histidine kinase 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|150377820|ref|YP_001314415.1|NC_009621
Sequence length 1160
Comment putative PAS/PAC sensor protein [Sinorhizobium medicae WSM419 plasmid pSMED02]
Sequence
MVQKADPPIVAIGASAGGVQALQTFFDLMPIDTGATFVVIVHLDPHARSELANILAARTR
MPVTQVEDQARLESNHVYVIAPNRRLKIADGTIAALPFEEPHALRAPIDFFFRSLAEEHR
SEFAIILTGAGADGAIGVKAIKEADGIVLVQDPDEAEYASMPRNAIATEVADFVLPIREL
PHRVAELLARRDQLPSHQFRVNDDEMIGRIVAHVRGRTGHDFSQYKRATILRRIGRRAQV
ARRETFADYYNYLRENPEEAQALFSDFLISVTTFFRDPSAFEVLAERVIPHLFDGKEVAD
KIRVWVPGCATGEEAYTIGILLLEEAARRDLSPEIQVFGSDLDEQALRIAREGRYPSTVE
GDLSEERLRRFFQREGDHYRVRRDLRDAVLFASHSLLRDPPFSHLDMISCRNLLIYLDRQ
LQQQVCNTFHYALNAGGFLFLGSSESADCPGLFRPVDREARIYRALAGAGARPMVLPALL
GPHKPEMKSTIIRTPPAGHGSDAAVHRQMLEKIAPPSMLVDESHHAIHLSENAGRFLKPS
GGPVSTAATDLVREEFRFDLRAALHRAFGRNEPTLSMPILADLDGQPHRVYLQVKPVVRG
TERTRHALVLFIEGEAIDKTQEVVLDTLDGRPTIDEAIRRLQEELQLAQNRLRLTSEESD
TATEELRAANEELQSMNEEYRSTAEELETSKEELQSINEELQTVNNELKLKLESISRANS
DLQNLMAATDIATLFLDPSLRIKRFTPRLTEIFNVTSNDEGRPITDFTHRLQYKRLSDDA
RAVLETLKPVEHEVKGRNDGWYLVRMRPYRTIEDKIDGVVVTFVDISERRHAEEAAKESG
QRLEQEMRLVELSRSPIFVWDFDDGVMQWNRGSEELYGYSREEALGRRKEELLKTGVPGS
SFDKLRRTLSQKGRWSGELNHTTKDGRVLTVESQIELVPFGERRLVLESTRDITDRKRWE
RRGQLLLNELSHRVKNTLAVVQSLARQTLRTTRSSEDFVERFEGRLAALASAHKLLVDSE
WSGAELNELARRQLDAYAASDRRRLQIEGEPVTLPPDLATPFGLVLHELATNAAKYGAFS
TGNGQIKLSWKLGNNGRSLGVIWQERGGPPVEPPSEQGFGGVLIEKSLPGSTVHRDFQPD
GVVCTIDIELPEIRPDGGEK
Download sequence
Identical sequences A6ULF2
WP_011970590.1.89664 YP_001314415.1.44884 gi|150377820|ref|YP_001314415.1| 366394.Smed_5776 gi|150377820|ref|YP_001314415.1|NC_009621

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