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Domain assignment for gi|332308856|ref|YP_004436706.1|NC_015498 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|332308856|ref|YP_004436706.1|NC_015498
Domain Number 1 Region: 304-468
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5.76e-38
Family Histidine kinase 0.0018
Further Details:      
 
Domain Number 2 Region: 232-315
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 2.35e-16
Family Homodimeric domain of signal transducing histidine kinase 0.0033
Further Details:      
 
Weak hits

Sequence:  gi|332308856|ref|YP_004436706.1|NC_015498
Domain Number - Region: 198-245
Classification Level Classification E-value
Superfamily HAMP domain-like 0.000471
Family HAMP domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|332308856|ref|YP_004436706.1|NC_015498
Sequence length 470
Comment heavy metal sensor signal transduction histidine kinase [Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01]
Sequence
MNLKDLSKRPSSLAFRVTILVGLTIFVCLTFISLMVQQSIAQHFEEQDADELNEVFLAVK
RKLNTAYNEGVAPSSILFQAVSGHHGVYYLVKNKDNEVIFSSESAVLEKYPGDTYELEQI
TPSMLSLFFDGEHMLRATEITVRIEDGNSQTHYQVIVASNMEFHMNYMEDFETTLWGIIV
LSGAITILAARFAVYRGHSPLRRLSRKIGSITSDKLDIRLEPTEVPVELANLVESFNAMI
ERLESGFEQLSHFSADIAHELRTPITNLTTQTQVILNQPRSTNEYTDILYSNLEEYERMS
KMVSDMLLLAQTEHGLIKPNAERIDCHKEIGELIEYFELLAEEKHISIQLIGHKITLMCD
KSMFRQALSNLLSNAIRYTPDNAEVTVSTQIQDNEALISISNPGNKIPDIQLSRLFDRFY
RADPSRKRDGQGAGLGLTIARSVMEVNAGHIRVESNEQTTTFTVILPLNH
Download sequence
Identical sequences F4AUV1
WP_013755307.1.56369 gi|332308856|ref|YP_004436706.1| gi|332308856|ref|YP_004436706.1|NC_015498

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