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Domain assignment for gi|337735041|ref|YP_004634489.1|NC_015686 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|337735041|ref|YP_004634489.1|NC_015686
Domain Number 1 Region: 1-120
Classification Level Classification E-value
Superfamily CheY-like 0.000000000000285
Family CheY-related 0.021
Further Details:      
 
Domain Number 2 Region: 126-208
Classification Level Classification E-value
Superfamily C-terminal effector domain of the bipartite response regulators 0.0000000283
Family PhoB-like 0.02
Further Details:      
 
Weak hits

Sequence:  gi|337735041|ref|YP_004634489.1|NC_015686
Domain Number - Region: 264-350
Classification Level Classification E-value
Superfamily TPR-like 0.00037
Family Tetratricopeptide repeat (TPR) 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|337735041|ref|YP_004634489.1|NC_015686
Sequence length 359
Comment response regulator [Clostridium acetobutylicum DSM 1731 plasmid pSMBa]
Sequence
MGMISAIIVDNEVLSANNLYNILKENSEFNIKARVNSEEEALLELEKIKVDIIFINIEMQ
VVEFVAKAREINDKVKIIFITAYTKYSSDSNMQYLIKPVTKEKLNKVILKLKPNNESKSE
ESWDIKVSCFGKFTVQNRQGTIAKWITKKAEELFALLIDQKGKAINTNKIIYMLWRNFDT
TKATVNLHTTVYNIKKALSRLNAQEVFICSDGFYKVDVSKIKCDVWEVISKIRTISRRNL
TIDEVGESIKIIEDGYFKENYFDWAEDKNKYFESVYLKLIFIKAKECKKSRNFNEAIELI
RIGLKVDELNESFNKELIRLLMLVGDEIEAIKHYNFYKRKLRKELGINVDCKIYEWIKS
Download sequence
Identical sequences Q97TT7
gi|337735041|ref|YP_004634489.1| gi|15004714|ref|NP_149174.1|NC_001988 gi|337735041|ref|YP_004634489.1|NC_015686 gi|15004714|ref|NP_149174.1| NP_149174.1.94244 WP_010890695.1.17575 WP_010890695.1.17905 WP_010890695.1.48544 WP_010890695.1.57811 WP_010890695.1.71350 WP_010890695.1.92914 272562.CA_P0009

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