The results are sorted from lowest E-value to highest E-value. Strong classifications have a low E-value. Weak classifications have an E-value greater than 0.0001. Weak hits are shown in gray. Weak hits are not shown on the domain architecture.
The family level classification is conditional on the domain being a member of the specified superfamily. There is a possibility that the selected domain is a member of a sub-family for which no structure has yet been solved.
| Sequence: |
gi|384533080|ref|YP_005715744.1|NC_017323 |
| Domain Number 1 |
Region: 143-260 |
| Classification Level |
Classification |
E-value |
| Superfamily |
PYP-like sensor domain (PAS domain) |
1.74e-27 |
| Family |
Heme-binding PAS domain |
0.0033 |
| Further Details: |
|
| |
| Domain Number 2 |
Region: 574-702 |
| Classification Level |
Classification |
E-value |
| Superfamily |
PYP-like sensor domain (PAS domain) |
6.98e-22 |
| Family |
Flavin-binding PAS domain |
0.078 |
| Further Details: |
|
| |
| Domain Number 3 |
Region: 293-438 |
| Classification Level |
Classification |
E-value |
| Superfamily |
GAF domain-like |
5.89e-21 |
| Family |
GAF domain |
0.017 |
| Further Details: |
|
| |
| Domain Number 4 |
Region: 23-132 |
| Classification Level |
Classification |
E-value |
| Superfamily |
PYP-like sensor domain (PAS domain) |
0.00000000000000593 |
| Family |
PYP-like |
0.028 |
| Further Details: |
|
| |
| Domain Number 5 |
Region: 458-575 |
| Classification Level |
Classification |
E-value |
| Superfamily |
PYP-like sensor domain (PAS domain) |
0.00000000000785 |
| Family |
Heme-binding PAS domain |
0.055 |
| Further Details: |
|
| |
| Sequence: |
gi|384533080|ref|YP_005715744.1|NC_017323 |
| Domain Number - |
Region: 780-901 |
| Classification Level |
Classification |
E-value |
| Superfamily |
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
0.000722 |
| Family |
Histidine kinase |
0.031 |
| Further Details: |
|
| |
The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by 
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Information Content (IC) is an information theoretic score measured in bits of how informative it is to assign a given ontological term to a domain archtecture. The higher the score the more informative it is to talk about the term given the domain architecture.
H-score (hypergeometric score) indicates the strength of assigning an ontological term to this domain architecture. Assignments with higher scores are of a better quality. Details for the methodology be found on the dcGO website.
| Biological Process |
IC (bits) |
H-Score |
| Cellular Component |
IC (bits) |
H-Score |
| Molecular Function |
IC (bits) |
H-Score |
