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Domain assignment for gi|385334022|ref|YP_005887971.1|NC_017507 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385334022|ref|YP_005887971.1|NC_017507
Domain Number 1 Region: 235-431
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 1.83e-45
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00012
Further Details:      
 
Domain Number 2 Region: 159-262
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 6.46e-22
Family Flavin-binding PAS domain 0.036
Further Details:      
 
Domain Number 3 Region: 37-138
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.47e-21
Family Heme-binding PAS domain 0.059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|385334022|ref|YP_005887971.1|NC_017507
Sequence length 434
Comment methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor [Marinobacter adhaerens HP15 plasmid pHP-187]
Sequence
MGFFNKQELRDAEAALKKCQAGQSKVQRTLDAIRQAVGFIVFSPDGIVEDVNDKLLHIFG
YTREQVIGQHHKVLVEQSYAQSPEYAEFWESLRAGQFIHGQFPRLNASGEKVWLEGSYFP
VKTETGQVINVVKIAADVTDAQTQSADKEALLTALDSYMAVIKFTPDGTVLDANSNFLHA
MGYELSEIVGQAHRIFCLDDFYRDNPDFWRRLASGESFSGRFQRKDAQGRVIWLEATYSP
VYDELGRISKIVKFAMDITEQVRRSEVARESAAATSEQTSQIAGQTTRAITEAVEASAHV
ADEVAGALRLSESLGDQAAQIQGIVGTIQAVADQTNLLALNAAIEAARAGDVGRGFAVVA
DEVRTLAARTAESLAQISDVVQANNEMISDMRRRMDHVSQLSSSSSKRIASLSEGISEVD
RGIADLAHMMADLG
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Identical sequences E4PS61
gi|385334022|ref|YP_005887971.1| gi|385334022|ref|YP_005887971.1|NC_017507 WP_014579385.1.11983

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