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Domain assignment for gi|386335647|ref|YP_006031817.1|NC_017575 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|386335647|ref|YP_006031817.1|NC_017575
Domain Number 1 Region: 369-541
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4.19e-44
Family Histidine kinase 0.0014
Further Details:      
 
Domain Number 2 Region: 299-381
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 0.00000000000000981
Family Homodimeric domain of signal transducing histidine kinase 0.0019
Further Details:      
 
Domain Number 3 Region: 228-277
Classification Level Classification E-value
Superfamily HAMP domain-like 0.0000000144
Family HAMP domain 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|386335647|ref|YP_006031817.1|NC_017575
Sequence length 556
Comment sensory histidine kinase in two-component regulatory system with baer [Ralstonia solanacearum Po82 plasmid megaplasmid]
Sequence
MHPSRILMFRVRLSLAFALMVALVCVQAGFVYWGANRVNDYATHSRLASDILSELLELSA
NKQRLRVWASQRLMNADASPEVRDRLLASMQASAATLRYLARRDIDLWGEISARDGEPTP
PEVLQLASVTDLLGDNIAAVQARLVPLVPLQRDADFAGVWHELNEVFDMARGRDLRELIN
GAIERQRRAVPIARAATERGLDRVRTQALSMVVLVLLAAVTLALHLNRRLQRPLDRLLEG
ARALRTGALDHRVPIGSGDEFDRVAEGFNAMAAELQQHRNDADAARRRLEDAVQARTGEL
RTAHDALQRIDQRRRQLFADLGHELRTPTTAIRGEAEIALRGGDKPPHEYRMALERIVGG
AKQLTGRINDLLLIAKAEADQLAMRPQLIDLPSVLHDAADLADALGAEHDVKIQLELPQD
TAALTLPADPDRLRQAIVIVLDNAVRYSPRGGTVQLRCHLQPDAVRIEVQDHGIGIDADE
LPMVFERFVRGRRARAHRADGTGIGLSIAQAIVQAHRGHITLQSAPQQGTRVCIELPRHH
AAGADDTPHRHEHSRH
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Identical sequences F6G8R2
gi|386335647|ref|YP_006031817.1|NC_017575 gi|386335647|ref|YP_006031817.1|

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