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Domain assignment for gi|392384477|ref|YP_005033673.1|NC_016618 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|392384477|ref|YP_005033673.1|NC_016618
Domain Number 1 Region: 516-697
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 7.99e-43
Family Histidine kinase 0.0012
Further Details:      
 
Domain Number 2 Region: 1027-1150
Classification Level Classification E-value
Superfamily CheY-like 1.85e-36
Family CheY-related 0.0032
Further Details:      
 
Domain Number 3 Region: 208-381
Classification Level Classification E-value
Superfamily GAF domain-like 1.4e-29
Family GAF domain 0.0071
Further Details:      
 
Domain Number 4 Region: 749-873
Classification Level Classification E-value
Superfamily CheY-like 1.32e-24
Family CheY-related 0.00095
Further Details:      
 
Domain Number 5 Region: 444-527
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 2.35e-19
Family Homodimeric domain of signal transducing histidine kinase 0.0014
Further Details:      
 
Domain Number 6 Region: 5-222
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.000000000000017
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.014
Further Details:      
 
Domain Number 7 Region: 907-964
Classification Level Classification E-value
Superfamily CheY-like 0.00000104
Family CheY-related 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|392384477|ref|YP_005033673.1|NC_016618
Sequence length 1162
Comment putative Sensor histidine kinase (GAF domain-like) (fragment), partial [Azospirillum brasilense Sp245 plasmid AZOBR_p2]
Sequence
MANGDLSRKITVDVKGEILELKDTINTMVDQLNSFASEVTRVAREVGTEGKLGGQAQVKG
VAGTWKDLTDNVNMMAANLTGQVRGIAEVVTAVAEGNLKRKLTVAARGEIAALADTINGV
IETLAIFADQVTNVAREVGIEGKLGGQAKVPGATGVWGDLTDNVNQLAANLTTQVRAIAE
VATAVTKGDLTRSIAVEASGEVAALKDNINEMIRNLRDTTQKNAEQDWLKTNIAKFTRML
QGERDLVTVTNMILSEIAPLVNAQHGVLYVTSRDGDEPVLDLVASYALKERDGLGTRFTL
KQGLVGQCAHEKKPILLTNVPKDYVRISSGLGEAAPLNIIVLPVLFENEVNAVLELASFG
HFSETHRSFLEQLTESIGIVLNTIATNMRTEGLLKQSQRLTAELQSQQEELKTTNERLEH
QAASLRQSEELLMAQQEKLRQTNEALEEKAEQLSLTSKYKSQFLANMSHELRTPLNSLLI
LSKLLSDNGDHNLTPRQVEFARTINAAGSDLLNLINDILDLSKIESGTVTLEIGAVVLDD
LRGHVERTFAQLAEEKGLRFDIDMTQPLPAAIQTDQKRLEQVLNNLLSNAFKFTETGGVT
FRVGLAGEGWSAAHPVLNAAEGVLAFTVVDTGIGIPENKQRIIFEAFQQADGTTSRKYGG
TGLGLSISREIARLLGGEIRVQSESGAGSAFTLYVPMEFDIARYGDPATKLAPFPTPTRP
IVVPGPEERLALPQHHPVADDRERIRPGDPVVLIVEDDVKFASILVDLAREKGFKAILSH
AGSPAMPMARKYRPDAVMLDIGLPDIDGWALLDLLKRDPHTRHIPVHVISAKEERRRGLA
MGAFDYTEKPADREAIFAALAKVKGFVERHQRRLLIVEKVPNPETGGIAGLIDHDKGVGG
GGGDDIDISTVTSAEAARALLAKERFDCMVLDLTIPQPSDFELIDSLRTRDSTAWMPVVA
YVSDAIAPEDEARLRRLAETVVLRSVHSADSLLDETALFLHRAVDRLPDDKRNALDQIRQ
RDPVLAGRKALIVDDDFRNIFSLASVLEAHDMTVLHAESGPEGLELLKAHPDLDVALVDI
MMPLMDGYQTIREIRATASGRGLPVIAVTAKAMKGDREKCIEAGATDYLAKPVDIDHLLS
LLRVWAGRRQDDDAGHTHAGRE
Download sequence
Identical sequences G8AW65
gi|392384477|ref|YP_005033673.1| gi|392384477|ref|YP_005033673.1|NC_016618

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