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Domain assignment for gi|46562195|ref|YP_009097.1|NC_005863 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|46562195|ref|YP_009097.1|NC_005863
Domain Number 1 Region: 168-410
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 9.25e-70
Family Extended AAA-ATPase domain 0.000000605
Further Details:      
 
Domain Number 2 Region: 2-212
Classification Level Classification E-value
Superfamily CheY-like 7.68e-29
Family CheY-related 0.0025
Further Details:      
 
Domain Number 3 Region: 382-474
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000108
Family FIS-like 0.059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|46562195|ref|YP_009097.1|NC_005863
Sequence length 476
Comment sigma-54 dependent transcriptional regulator/response regulator [Desulfovibrio vulgaris str. Hildenborough plasmid pDV]
Sequence
MPGLLIVEDNEDVRRQLRWGLAKEPYDLHLAGSVDEALALQREHAPAVVTLDLGLPPDAE
GASEGFRGLAALLDHDPRTKVIVVTGHHDMENALRAIEGGAYDFCQKPADLEMLKVIISR
AFFLHGLQGGGAMASASGMASASGGASAPDAVSGAGAGGGKPDDGWQGIVGRCPSMRAVF
ETVAKVAVTGAPVLVTGESGTGKELVARAIHALGPRCTRTFVAINCGAIPDNLLEAEFFG
YEKGAFTGATQRVQGKVEYADGGTLFLDEIGELPANLQVKLLRFLQEKVIQRVGGRKDIA
VDARIVAATNRDIQTEIASGRFREDLYYRIGVVPVALPPLRARGDDILLLARHFLESSAG
EGTGNIVGFSPAAEQAMLRYAWPGNVRELENKVRRAVIFASGRRIMPDDLGFDETPAKAA
APRPEGSLREARNALERDMVLSALDKCGGNIVQASLAIGVSRPTFYDLLRKHGIEA
Download sequence
Identical sequences A0A0E0T6U8 Q72WN2
882.DVUA0057 WP_011176635.1.14085 YP_009097.1.77684 gi|387133938|ref|YP_005703928.1| gi|46562195|ref|YP_009097.1| gi|387133938|ref|YP_005703928.1|NC_017311 gi|46562195|ref|YP_009097.1|NC_005863

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