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Domain assignment for gi|119387716|ref|YP_918750.1|NC_008688 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|119387716|ref|YP_918750.1|NC_008688
Domain Number 1 Region: 28-386
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.18e-68
Family L-arabinose binding protein-like 0.00076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|119387716|ref|YP_918750.1|NC_008688
Sequence length 400
Comment extracellular ligand-binding receptor [Paracoccus denitrificans PD1222 plasmid 1]
Sequence
MGKFRLSGMAACALAACAALPAGPAAAEVAIGVFVPTTGVLAPLGNDMRNGFLLAAKGAI
VKGEPVRLIVEDTGGNPANGLRKAQKLVLEDKVSLLLGGASSAVTLGINAQAPRLNVPIV
TTNAQAVPITGEQCSRFMFRTVPHDGNTAKASAAMFAERPDMIGRKWFVVYHDYAYGLSN
KAEFSHIPGIQIAGEAGRPVGTADWSSAIAQIQASDADGIYLALAVGDDLTAFVNQARGY
GLDFPIMTPAGIPDTMLQALGKNGVGMIANGLTASWMQEDESPQIAELVKAYHEEYGIVP
GYQAIQAYAGMQFVLAVLEAADEISTDAIIKALEDTVAETVVGPIDIRAEDHQGMQGTFV
AEAVALDPPRHGASIGWKPVTRMSWDQINLLPEETGCKGF
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Identical sequences A1BC10
WP_011751212.1.25907 WP_011751212.1.3707 WP_011751212.1.52749 318586.Pden_4994 gi|119387716|ref|YP_918750.1| gi|119387716|ref|YP_918750.1|NC_008688

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