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Domain assignment for gi|150375804|ref|YP_001312400.1|NC_009620 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|150375804|ref|YP_001312400.1|NC_009620
Domain Number 1 Region: 29-267
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 8.14e-17
Family L-arabinose binding protein-like 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|150375804|ref|YP_001312400.1|NC_009620
Sequence length 334
Comment basic membrane lipoprotein [Sinorhizobium medicae WSM419 plasmid pSMED01]
Sequence
MNTAFKRILAGPVVAAAVACGSGAAQAEPLKIAAVSGYFSQGFGISIVNGLERAKKDLGV
ELKIVDTGNRALDYEEQFNNLAKGGQYDLIFVMGWELVDALQKSNKTYPDQRFIFIDGVL
DSPTMTYIDFVEEEGSFLAGALAGMLTQEKVEGFDSSSEVGFLGGRDIPVIRNFMSGMEQ
GVAKVASDVTVNGVFAGTFDDPAKGSELAMTLYGQGVDIIYQAAGPTGEGVLQAAKAARK
YAIGVDIDQCGTAPGAILASMLKRADVAVYELIKGEAEGNKIKPGAVAFGVKAGGVELKI
CDEVKDKVPAEIVAKLEELRQGVADGSVAVKLNQ
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Identical sequences A6UFN7
YP_001312400.1.44884 366394.Smed_3654 gi|150375804|ref|YP_001312400.1| gi|150375804|ref|YP_001312400.1|NC_009620

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