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Domain assignment for gi|150375920|ref|YP_001312516.1|NC_009620 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|150375920|ref|YP_001312516.1|NC_009620
Domain Number 1 Region: 29-305
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.26e-78
Family L-arabinose binding protein-like 0.0000135
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|150375920|ref|YP_001312516.1|NC_009620
Sequence length 313
Comment periplasmic binding protein/LacI transcriptional regulator [Sinorhizobium medicae WSM419 plasmid pSMED01]
Sequence
MKLTRRMTIAAFAAVLAASSAIPAYAADLIAIITPSHDNPFFKAEAVGAEAKAKELGYET
LVLVHDDDANKQSQLIDTAIGRGAKAIILDNAGSEASIAAVQKAKDAGVPSFLIDREINA
TGVAVSQIVSNNYQGAQLGAEEFVKLMGESGNYVELLGREADLNAGIRSKGYHDVIDEYP
EMKMVAQQSANWSQTEGYSKMETILQANPDIKGVISGNDTMAMGAIAALHAAGRKDVIVV
GFDGSNDVRDSIKSGGIKATVLQPAYAQAQMAVQQAHEYITTGKTPAEEKQLMDCVLINS
ENAGQLETFALID
Download sequence
Identical sequences A6UG03
YP_001312516.1.44884 366394.Smed_3770 gi|150375920|ref|YP_001312516.1|NC_009620 gi|150375920|ref|YP_001312516.1|

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