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Domain assignment for gi|150376723|ref|YP_001313319.1|NC_009620 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|150376723|ref|YP_001313319.1|NC_009620
Domain Number 1 Region: 27-166,201-243
Classification Level Classification E-value
Superfamily Glycoside hydrolase/deacetylase 0.000000000000167
Family NodB-like polysaccharide deacetylase 0.043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|150376723|ref|YP_001313319.1|NC_009620
Sequence length 256
Comment polysaccharide deacetylase [Sinorhizobium medicae WSM419 plasmid pSMED01]
Sequence
MKMGSAWQRCVDRLDALQDGGKCIDFWLRDDDAVEPSPALDRLLDLTGRFSVPVTLAVIP
ASTDERLSRSLSSRMHVDVAVHGWSHRNHAPAIEKRQELGAHRPRETVAADLRAGWARLS
ALYPAALAPLLVPPWNRIDPGLVSELQEIGFEALSVFGPEDGEKCAAFRDTGLQLINTHV
DVMDWHGTRGCRPHGDILRDIDRRLDEVENSGGSVGILTHHLVHDESVWEFLSKLFEITT
SNPACRWRRITELIDR
Download sequence
Identical sequences A6UIA6
gi|150376723|ref|YP_001313319.1| 366394.Smed_4586 gi|150376723|ref|YP_001313319.1|NC_009620 WP_012061519.1.7720 YP_001313319.1.44884

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