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Domain assignment for gi|241113408|ref|YP_002973243.1|NC_012848 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|241113408|ref|YP_002973243.1|NC_012848
Domain Number 1 Region: 22-305
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.88e-69
Family L-arabinose binding protein-like 0.0000404
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|241113408|ref|YP_002973243.1|NC_012848
Sequence length 309
Comment periplasmic binding protein/LacI transcriptional regulator [Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501]
Sequence
MKTATLASIALAISISAAHAQTIGVSMSGLDKFRTALLNGVVSHGQTISGLKLVTENANG
DKELQKQQVQKLIADKVDAIILAVSDGDLGPQMTKMAADAGIPLVYINNVPSNLLDLPDN
QVVVASNEKESGTLETKQVCALLKGKGRVVVLMGEPFHAAARARTQDISDVIATPDCRGL
QIVERQAAYWSSDYADQQMQEWLSAGVKFDAVIANNDEMALGAIRAMKKAGIPMKNVVVA
GVDATDDALAAMVAGDLDVTILQSAVGQGAAAVDAAVKLIRKEKVPRENNVPFELVTPEN
IATYLPKSQ
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Identical sequences C6B5C4
395491.Rleg_5068 gi|241113408|ref|YP_002973243.1| gi|241113408|ref|YP_002973243.1|NC_012848 WP_012755429.1.14669

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