SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|357408012|ref|YP_004919935.1|NC_016113 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|357408012|ref|YP_004919935.1|NC_016113
Domain Number 1 Region: 11-141
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 5.46e-28
Family MarR-like transcriptional regulators 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|357408012|ref|YP_004919935.1|NC_016113
Sequence length 142
Comment transcriptional regulator, MarR family [Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT]
Sequence
MSDTTHPSPADLVEPLARTVRAYHDELAEVAQRHGLTTAQARALIALDQPLSMRALADHL
VCDASNATGLIARMEARGLVRRETAPHDRRSKVVTPTAPGRELAHRLRSDMHRLHTALTA
LTPAERAALLPLLDRLGDLLER
Download sequence
Identical sequences F8JMS3
gi|357408012|ref|YP_004919935.1| gi|386352997|ref|YP_006051244.1| gi|357408012|ref|YP_004919935.1|NC_016113 gi|386352997|ref|YP_006051244.1|NC_017585 WP_014151098.1.28582 WP_014151098.1.70206

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]